WormBase Tree Display for Variation: WBVar00270509

WBVar00270509 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00270509
    Other_name: uCE4-855
      cewivar00038501
      CE50613:p.Pro136Ser
      F49F1.6b.1:c.406C>T
      CE34873:p.Pro206Ser
      F49F1.6a.1:c.616C>T
    HGVSg: CHROMOSOME_IV:g.4121672G>A
  Sequence_details: SMap: S_parent: Sequence: F49F1
    Flanking_sequences: AATTTCGAAATGAGCATCAATCTATAAACTAACTTTGGCGACGAATCCTTGCATGGTGGCTTTGGCGTAGTTGATGGAAGCTTCTTGGTCGTGGTAGCTG CAGTTTTGTTGTAGTACTTGGTACTACTGTAGTCGTAGGCTTTACCGTAGTGAGCAACGTAGTTTGAGCCATAGGTACCCCAGTACTTCCACAAACTCCA
    Mapping_target: F49F1
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (25)
    Analysis: SNP_Swan
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00018646
    Transcript: F49F1.6b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: F49F1.6b.1:c.406C>T
        HGVSp: CE50613:p.Pro136Ser
        cDNA_position: 406
        CDS_position: 406
        Protein_position: 136
        Exon_number: 4/5
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
      F49F1.6a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: F49F1.6a.1:c.616C>T
        HGVSp: CE34873:p.Pro206Ser
        cDNA_position: 762
        CDS_position: 616
        Protein_position: 206
        Exon_number: 6/8
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
  Reference: WBPaper00005369
  Method: SNP_Swan