WormBase Tree Display for Variation: WBVar00270384

WBVar00270384 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00270384
    Other_name: uCE4-698
      Y54G2A.33.1:c.214+557del
      Y54G2A.15.1:c.*40del
      Y54G2A.33.2:c.214+557del
    HGVSg: CHROMOSOME_IV:g.2843245del
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: TTGTTAGTGTAGACTCCTTGATACTTATCAGGGCGGTGCTCTTCAAAATACTATACAAGACAGTTCCTTGAAATATTTTATCATTGTTTTAGGGAACTTT AACCGTTTATTCAAAGATCCACACTGAAAAACCATCATCTCAAGGCAAGTTCAAAACTCCAAAAATGAGAATTCCAAAGAAAAAACTCGCAATATTGTCA
    Mapping_target: Y54G2A
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
    Analysis: SNP_Swan
    Status: Live
  Affects: Gene: WBGene00021880
      WBGene00021895
    Transcript: Y54G2A.33.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.33.1:c.214+557del
        Intron_number: 2/4
      Y54G2A.33.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.33.2:c.214+557del
        Intron_number: 2/3
      Y54G2A.15.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.15.1:c.*40del
        cDNA_position: 537
        Exon_number: 7/7
  Reference: WBPaper00005369
  Method: SNP_Swan