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WormBase Tree Display for Variation: WBVar00270218

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Name Class

WBVar00270218EvidencePaper_evidenceWBPaper00005369
NamePublic_nameWBVar00270218
Other_nameuCE4-501
B0545.1a.1:c.279+1634del
B0545.1b.2:c.-133+1634del
B0545.1b.1:c.-133+1634del
HGVSgCHROMOSOME_IV:g.95464del
Sequence_detailsSMapS_parentSequenceB0545
Flanking_sequencesAACGATATTTATGAGGCTATTAGTCTTCTAATTAAGGTAAGAAATTCGGATTGTTTGCCACGCACATTTTGTGGGCGGAGCTTATCACAGCTTTTGATTTCAAAATGGTTTTCTGGCAGCATTAAGAAAATTTCAGAGTGGTCAGAAGTTAAAAAATTTTTTGTAAGTTCTATAGAACGGTTTAGAAAATTCCAAAAAAA
Mapping_targetB0545
Type_of_mutationDeletionT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Swan
AnalysisSNP_Swan
StatusLive
AffectsGeneWBGene00006599
TranscriptB0545.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0545.1b.1:c.-133+1634del
Intron_number4/13
B0545.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0545.1a.1:c.279+1634del
Intron_number4/12
B0545.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0545.1b.2:c.-133+1634del
Intron_number2/10
ReferenceWBPaper00005369
MethodSNP_Swan