WormBase Tree Display for Variation: WBVar00270021
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WBVar00270021 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00270021 | |||
Other_name | uCE3-1203 | ||||
cewivar00689024 | |||||
Y39A1C.3.1:c.*192_*194del | |||||
HGVSg | CHROMOSOME_III:g.10866966_10866968del | ||||
Sequence_details | SMap | S_parent | Sequence | Y39A1C | |
Flanking_sequences | AAATTCCTAATTATTTATTACATATTTTTATTGCTTACTGGTAGTTTGAATTTGATTTCTATAAAACAATGAACAGAATCATTTGCATTGAAACTTTTACT | TATAAACTCAAAAAGTTCTCGAAATTGAATTCCAAAGAACTGAGTGGATATAAATCGTGCAGAACAAATTTTGGAAATTTTGGGCTTTTCGAAAGGA | |||
Mapping_target | Y39A1C | ||||
Type_of_mutation | Deletion | TAA | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
Analysis | SNP_Swan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00000475 | |||
Transcript | Y39A1C.3.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A1C.3.1:c.*192_*194del | ||||
cDNA_position | 1161-1163 | ||||
Exon_number | 5/5 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |