WormBase Tree Display for Variation: WBVar00269687

WBVar00269687 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00269687
    Other_name: uCE3-833
      CE01029:p.Lys51AsnfsTer3
      M01F1.1.1:c.149del
    HGVSg: CHROMOSOME_III:g.3493029del
  Sequence_details: SMap: S_parent: Sequence: M01F1
    Flanking_sequences: TCATAGCTTTTCCAAAACTCCTACAATTCTCAGTCTCGTTGCTCTATTCATGGTCTCCGAGAGCCTTTCCATGTGCTCTTTCTCAACTTTCAACAATTTT CCAGCCGAGACCCAGCTTCATCCATTTCTTTCAAGAGCCTTAGTTCCTCTTTTACGATTGCTTTCTAGAAAAAATTCCGATTTTTTGGCCAAGAAACATT
    Mapping_target: M01F1
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
    Analysis: SNP_Swan
    Status: Live
  Affects: Gene: WBGene00001639
    Transcript: M01F1.1.1 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: M01F1.1.1:c.149del
        HGVSp: CE01029:p.Lys51AsnfsTer3
        cDNA_position: 163
        CDS_position: 149
        Protein_position: 50
        Exon_number: 3/14
        Codon_change: gAa/ga
        Amino_acid_change: E/X
  Reference: WBPaper00005369
  Method: SNP_Swan