WormBase Tree Display for Variation: WBVar00269666
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WBVar00269666 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00269666 | |||
Other_name | uCE3-812 | ||||
H06I04.1d.1:c.58-1096del | |||||
H06I04.1a.1:c.208-1096del | |||||
H06I04.1b.1:c.208-1096del | |||||
HGVSg | CHROMOSOME_III:g.3096352del | ||||
Sequence_details | SMap | S_parent | Sequence | H06I04 | |
Flanking_sequences | CATCCTACACCCCCTCAACATCTTCCAATGAAATTCTGAGCATGTTACTCTCTATATAAGAGACATAGACAATCAGACGGAGAGAAGACATGCTTTTTTT | CCATTTTGTTCGAGTTTTTTGAATTATGAATTAATAAGGCGCCATAATTCGGGTTTTCAGCTGTTTTGAATTTCGATAAGCCTGAAATTCCATAGAAACC | |||
Mapping_target | H06I04 | ||||
Type_of_mutation | Deletion | T | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
Analysis | SNP_Swan | ||||
Status | Live | ||||
Affects | Gene | WBGene00019167 | |||
Transcript | H06I04.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.1a.1:c.208-1096del | ||||
Intron_number | 2/6 | ||||
H06I04.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.1d.1:c.58-1096del | ||||
Intron_number | 1/4 | ||||
H06I04.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.1b.1:c.208-1096del | ||||
Intron_number | 2/5 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |