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WormBase Tree Display for Variation: WBVar00269666

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Name Class

WBVar00269666EvidencePaper_evidenceWBPaper00005369
NamePublic_nameWBVar00269666
Other_nameuCE3-812
H06I04.1d.1:c.58-1096del
H06I04.1a.1:c.208-1096del
H06I04.1b.1:c.208-1096del
HGVSgCHROMOSOME_III:g.3096352del
Sequence_detailsSMapS_parentSequenceH06I04
Flanking_sequencesCATCCTACACCCCCTCAACATCTTCCAATGAAATTCTGAGCATGTTACTCTCTATATAAGAGACATAGACAATCAGACGGAGAGAAGACATGCTTTTTTTCCATTTTGTTCGAGTTTTTTGAATTATGAATTAATAAGGCGCCATAATTCGGGTTTTCAGCTGTTTTGAATTTCGATAAGCCTGAAATTCCATAGAAACC
Mapping_targetH06I04
Type_of_mutationDeletionT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Swan
AnalysisSNP_Swan
StatusLive
AffectsGeneWBGene00019167
TranscriptH06I04.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.1a.1:c.208-1096del
Intron_number2/6
H06I04.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.1d.1:c.58-1096del
Intron_number1/4
H06I04.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.1b.1:c.208-1096del
Intron_number2/5
ReferenceWBPaper00005369
MethodSNP_Swan