WormBase Tree Display for Variation: WBVar00269660
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WBVar00269660 | Name | Public_name | WBVar00269660 | ||
---|---|---|---|---|---|
Other_name | uCE3-804 | ||||
haw142398 | |||||
cewivar00195788 | |||||
H06I04.6b.1:c.195T>C | |||||
H06I04.6b.2:c.195T>C | |||||
CE44121:p.Gly65= | |||||
H06I04.6a.1:c.-322T>C | |||||
H06I04.6a.3:c.-220T>C | |||||
H06I04.6b.3:c.195T>C | |||||
HGVSg | CHROMOSOME_III:g.3064128A>G | ||||
Sequence_details | SMap | S_parent | Sequence | H06I04 | |
Flanking_sequences | TCCATCCTCCACCGCTATTTGATCCCCGATTCGTGTTGGCTCCCAAGTTGGTACCCCTTGAGTAATCATTTCTTCCAGCTCCACTAGTTTTCGAGCCACC | CCGAGCCAACCACCTCCAGAAGATGTTCGTGCTCCCGACGATCCTCGGCTTCCAAATCCACCGCCACTACTTCCACGGGATCCACCACCGCCACGTGAGC | |||
Mapping_target | H06I04 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (16) | |||||
Person | WBPerson4037 | ||||
Analysis | SNP_Swan | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00562263 | |||
Status | Live | ||||
Affects | Gene | WBGene00019170 | |||
Transcript | H06I04.6b.2 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | H06I04.6b.2:c.195T>C | ||||
HGVSp | CE44121:p.Gly65= | ||||
cDNA_position | 216 | ||||
CDS_position | 195 | ||||
Protein_position | 65 | ||||
Exon_number | 2/7 | ||||
Codon_change | ggT/ggC | ||||
Amino_acid_change | G | ||||
H06I04.6b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | H06I04.6b.1:c.195T>C | ||||
HGVSp | CE44121:p.Gly65= | ||||
cDNA_position | 214 | ||||
CDS_position | 195 | ||||
Protein_position | 65 | ||||
Exon_number | 2/8 | ||||
Codon_change | ggT/ggC | ||||
Amino_acid_change | G | ||||
H06I04.6a.3 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6a.3:c.-220T>C | ||||
cDNA_position | 216 | ||||
Exon_number | 1/7 | ||||
H06I04.6b.3 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | H06I04.6b.3:c.195T>C | ||||
HGVSp | CE44121:p.Gly65= | ||||
cDNA_position | 214 | ||||
CDS_position | 195 | ||||
Protein_position | 65 | ||||
Exon_number | 2/8 | ||||
Codon_change | ggT/ggC | ||||
Amino_acid_change | G | ||||
H06I04.6a.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6a.1:c.-322T>C | ||||
cDNA_position | 216 | ||||
Exon_number | 1/8 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00005369 | |||||
Method | SNP_Swan |