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WormBase Tree Display for Variation: WBVar00269602

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Name Class

WBVar00269602NamePublic_nameWBVar00269602
Other_nameuCE3-742
haw141177
cewivar00148529
CE33935:p.Ser261=
R155.1b.2:c.783C>A
CE32713:p.Ser393=
R155.1a.1:c.1179C>A
R155.1b.1:c.783C>A
HGVSgCHROMOSOME_III:g.1953635G>T
Sequence_detailsSMapS_parentSequenceR155
Flanking_sequencesCCCCAATCCAATATTTAGTCTTAATTAGTCCAAACATAAGGAAAGCGAATCCCATCGAGTAGGAAATTGTGAGTTTTCCAAAAATCCAGATAAACGGCCTGAAATAGGCTTAGAAATGGCCTCAGACCATCCGGGAGTCCTCTTAATCAGAGCATAAAGCTGATTTTGAGCCTGAACACATCCGAGTTCAACGCCGAAAA
Mapping_targetR155
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisSNP_Swan
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
PersonWBPerson4037
AnalysisSNP_Swan
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00561042
StatusLive
AffectsGeneWBGene00020115
TranscriptR155.1b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScR155.1b.1:c.783C>A
HGVSpCE33935:p.Ser261=
cDNA_position1107
CDS_position783
Protein_position261
Exon_number7/9
Codon_changetcC/tcA
Amino_acid_changeS
R155.1b.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScR155.1b.2:c.783C>A
HGVSpCE33935:p.Ser261=
cDNA_position802
CDS_position783
Protein_position261
Exon_number6/8
Codon_changetcC/tcA
Amino_acid_changeS
R155.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScR155.1a.1:c.1179C>A
HGVSpCE32713:p.Ser393=
cDNA_position1207
CDS_position1179
Protein_position393
Exon_number8/10
Codon_changetcC/tcA
Amino_acid_changeS
ReferenceWBPaper00038208
WBPaper00005369
MethodSNP_Swan