WormBase Tree Display for Variation: WBVar00269591
expand all nodes | collapse all nodes | view schema
WBVar00269591 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00269591 | |||
Other_name | uCE3-726 | ||||
Y39A3CL.2.2:c.1565-206dup | |||||
Y39A3CL.2.1:c.1565-206dup | |||||
HGVSg | CHROMOSOME_III:g.1800048dup | ||||
Sequence_details | SMap | S_parent | Sequence | Y39A3CL | |
Flanking_sequences | GATTTTTGATCAGAAATCTTTGCCGAAAACGTGAAAACTGAGAATTTTTCCGCGTGGGAAACTCTAATTGGATTTTCTCACATTACTTTTTCCCGAAAAA | CTTGGATATTTACTTTTCCAAGCATCATATGACCCATTTTTATATAAAATATAACTTTTTCTCAACAAAAATGCCAAAAAAATGCCAAAAAACTGTTAAAA | |||
Mapping_target | Y39A3CL | ||||
Type_of_mutation | Insertion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
Analysis | SNP_Swan | ||||
Status | Live | ||||
Affects | Gene | WBGene00006513 | |||
Transcript | Y39A3CL.2.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A3CL.2.2:c.1565-206dup | ||||
Intron_number | 10/20 | ||||
Y39A3CL.2.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A3CL.2.1:c.1565-206dup | ||||
Intron_number | 11/21 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |