WormBase Tree Display for Variation: WBVar00268507

WBVar00268507 Name: Public_name: WBVar00268507
    Other_name: uCE2-1389
      haw128838
      cewivar00183334
      Y49F6A.5.1:c.82C>T
      CE53978:p.Arg28Ter
    HGVSg: CHROMOSOME_II:g.3609780G>A
  Sequence_details: SMap: S_parent: Sequence: Y49F6A
    Flanking_sequences: TCCTTCCAATCTTGTGGCTCTTGAGAACAGTCAAGATCCATACATTCCTCTAGGTTTTGAACACCTTCAACTTGATCACCAAAGTGTGTTGGGGAAGATC AGGCGTGGCACATGAAGAATACATGTGATCCTTCCAGTTTTTACGGACCTTCTTGATGGAGTTTTGCTCTTGGTTGAGCATTCTGAAAATTTGAACGAAT
    Mapping_target: Y49F6A
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
          WGS_De_Bono
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: AX
    Person: WBPerson4037
    Analysis: SNP_Swan
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01368214
        WBVar00548703
    Status: Live
  Affects: Gene: WBGene00021713
    Transcript: Y49F6A.5.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: Y49F6A.5.1:c.82C>T
        HGVSp: CE53978:p.Arg28Ter
        cDNA_position: 85
        CDS_position: 82
        Protein_position: 28
        Exon_number: 2/7
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
  Reference: WBPaper00038208
    WBPaper00037807
    WBPaper00005369
  Method: SNP_Swan