WormBase Tree Display for Variation: WBVar00267711

WBVar00267711 Name: Public_name: WBVar00267711
    Other_name (12)
    HGVSg: CHROMOSOME_II:g.406332G>A
  Sequence_details: SMap: S_parent: Sequence: C24H12
    Flanking_sequences: TCTTAGTCCATTTCACACAATTCTCAGCAATTGTCACAGTATTCCAGTTGGTGGCAGTTTCCGTCCAATCAGACATTCCTTGACTCGTATGTCGATCCAT ACTTGCATTGTTACCGGCTTCTCCTCCGTCGAGCACATGTTCGTAGAGCGGATGAACTGGGTCATCTGAAGGAAAATACAGAAATTAAAAAGCTGCAAAC
    Mapping_target: C24H12
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000034 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004599 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: SNP_Swan
          WGS_De_Bono
          Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: SNP_Swan
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01357697
    Status: Live
  Affects: Gene: WBGene00016074
    Transcript: C24H12.5b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C24H12.5b.1:c.1686C>T
        HGVSp: CE46879:p.Val562=
        cDNA_position: 1699
        CDS_position: 1686
        Protein_position: 562
        Exon_number: 11/12
        Codon_change: gtC/gtT
        Amino_acid_change: V
      C24H12.5a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C24H12.5a.1:c.1197C>T
        HGVSp: CE50975:p.Val399=
        cDNA_position: 1197
        CDS_position: 1197
        Protein_position: 399
        Exon_number: 7/8
        Codon_change: gtC/gtT
        Amino_acid_change: V
      C24H12.5e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C24H12.5e.1:c.897C>T
        HGVSp: CE51030:p.Val299=
        cDNA_position: 897
        CDS_position: 897
        Protein_position: 299
        Exon_number: 5/5
        Codon_change: gtC/gtT
        Amino_acid_change: V
      C24H12.5d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C24H12.5d.1:c.1029C>T
        HGVSp: CE51010:p.Val343=
        cDNA_position: 1029
        CDS_position: 1029
        Protein_position: 343
        Exon_number: 6/6
        Codon_change: gtC/gtT
        Amino_acid_change: V
      C24H12.5c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C24H12.5c.1:c.1680C>T
        HGVSp: CE46938:p.Val560=
        cDNA_position: 1689
        CDS_position: 1680
        Protein_position: 560
        Exon_number: 11/12
        Codon_change: gtC/gtT
        Amino_acid_change: V
  Reference: WBPaper00037807
    WBPaper00005369
  Method: SNP_Swan