WormBase Tree Display for Variation: WBVar00267658
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WBVar00267658 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00267658 | |||
Other_name | uCE1-1560 | ||||
Y105E8B.2b.1:c.899-817T>A | |||||
Y105E8B.2a.1:c.1793+151T>A | |||||
HGVSg | CHROMOSOME_I:g.14636135A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y105E8B | |
Flanking_sequences | ACCTCCAGACTGCTAGCGGCCACCACTACCGACTGAGCTATCCGCCCCCTAAAAATATTATGTTGAACATATAAAGTGTATCAAATTTAAATCTATTTTT | AAGTAATAATTTTTAGCTTTGAATTAACTAGCTTTTTTTGTATGATTATATTATATGCAAGACTATATTATAACTTTGTTGTTAGTCATACACTGAACTT | |||
Mapping_target | Y105E8B | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
Analysis | SNP_Swan | ||||
Status | Live | ||||
Affects | Gene | WBGene00013687 | |||
Transcript | Y105E8B.2b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8B.2b.1:c.899-817T>A | ||||
Intron_number | 4/6 | ||||
Y105E8B.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8B.2a.1:c.1793+151T>A | ||||
Intron_number | 7/9 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |