WormBase Tree Display for Variation: WBVar00267087
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| WBVar00267087 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00267087 | |||
| Other_name | uCE1-920 | ||||
| CE53740:p.Asn2255SerfsTer18 | |||||
| C48B6.6b.1:c.6763_6763+1insGTAT | |||||
| CE30258:p.Asn2253SerfsTer18 | |||||
| C48B6.6a.1:c.6757_6757+1insGTAT | |||||
| HGVSg | CHROMOSOME_I:g.6901880_6901883dup | ||||
| Sequence_details | SMap | S_parent | Sequence | C48B6 | |
| Flanking_sequences | GGACAACTTCACGCGCTTGAGAATTCTCCTGTTGATCTTGTTTCACAACCCATACATCTGAAAAAAAAAAAGTTTTTAGAAGGCTGGTATGAGCCATATAC | TTTCAAGTCCGGGAGGTGGTTTGAATTCTTGCTGTGAAGTACGGGATGTAATAGTCTCAATCGGGGTGAATGACAGATTGACGAGTGCTCCAAACACACT | |||
| Mapping_target | C48B6 | ||||
| Type_of_mutation | Insertion | ATAC | |||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| Analysis | SNP_Swan | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00004879 | |||
| Transcript | C48B6.6b.1 | VEP_consequence | frameshift_variant,splice_region_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | C48B6.6b.1:c.6763_6763+1insGTAT | ||||
| HGVSp | CE53740:p.Asn2255SerfsTer18 | ||||
| cDNA_position | 6763-6764 | ||||
| CDS_position | 6763-6764 | ||||
| Protein_position | 2255 | ||||
| Codon_change | aat/aGTATat | ||||
| Amino_acid_change | N/SIX | ||||
| C48B6.6a.1 | VEP_consequence | frameshift_variant,splice_region_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | C48B6.6a.1:c.6757_6757+1insGTAT | ||||
| HGVSp | CE30258:p.Asn2253SerfsTer18 | ||||
| cDNA_position | 6785-6786 | ||||
| CDS_position | 6757-6758 | ||||
| Protein_position | 2253 | ||||
| Codon_change | aat/aGTATat | ||||
| Amino_acid_change | N/SIX | ||||
| Reference | WBPaper00005369 | ||||
| Method | SNP_Swan |
