WormBase Tree Display for Variation: WBVar00266786
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| WBVar00266786 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00266786 | |||
| Other_name | uCE1-579 | ||||
| cewivar00132493 | |||||
| Y95B8A.10a.1:c.1611C>A | |||||
| Y95B8A.10b.1:c.1611C>A | |||||
| CE23151:p.Leu537= | |||||
| Y95B8A.10c.1:c.789C>A | |||||
| CE49213:p.Leu263= | |||||
| CE41085:p.Leu537= | |||||
| HGVSg | CHROMOSOME_I:g.875953G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y95B8A | |
| Flanking_sequences | GGATCGAGTTATCATTGTAAAGTATTGCAAGCGACTGTCGCGTATTGATCAGGTACGCGTTTCCTCTTCCAGGATGGTCTAGATCATGCACCGCCGCTGC | AGAAGAGCCGCCACCGCATGACTTTCATTCACGTGCACGGCGACCGACGGGGAGTCCAGGAAGAATGAGGTGGCCTGTAGGACGTCGGCTGCGTGAGTTG | |||
| Mapping_target | Y95B8A | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Analysis | SNP_Swan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00022389 | |||
| Transcript | Y95B8A.10b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y95B8A.10b.1:c.1611C>A | ||||
| HGVSp | CE41085:p.Leu537= | ||||
| cDNA_position | 1611 | ||||
| CDS_position | 1611 | ||||
| Protein_position | 537 | ||||
| Exon_number | 8/8 | ||||
| Codon_change | ctC/ctA | ||||
| Amino_acid_change | L | ||||
| Y95B8A.10c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y95B8A.10c.1:c.789C>A | ||||
| HGVSp | CE49213:p.Leu263= | ||||
| cDNA_position | 789 | ||||
| CDS_position | 789 | ||||
| Protein_position | 263 | ||||
| Exon_number | 2/4 | ||||
| Codon_change | ctC/ctA | ||||
| Amino_acid_change | L | ||||
| Y95B8A.10a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y95B8A.10a.1:c.1611C>A | ||||
| HGVSp | CE23151:p.Leu537= | ||||
| cDNA_position | 1611 | ||||
| CDS_position | 1611 | ||||
| Protein_position | 537 | ||||
| Exon_number | 8/11 | ||||
| Codon_change | ctC/ctA | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00005369 | ||||
| Method | SNP_Swan |
