WormBase Tree Display for Variation: WBVar00266620
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WBVar00266620 | Evidence | Paper_evidence | WBPaper00005591 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | u247 | ||||||
Other_name | W02D3.3.3:c.10C>T | |||||||
W02D3.3.1:c.10C>T | ||||||||
CE31080:p.Gln4Ter | ||||||||
W02D3.3.2:c.10C>T | ||||||||
HGVSg | CHROMOSOME_I:g.6725176C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | W02D3 | ||||
Flanking_sequences | aggttttctattttacagaaaatgggtctc | aatcggcagctgctcatttcataaatcgtt | ||||||
Mapping_target | W02D3 | |||||||
Type_of_mutation | Substitution | c | t | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Laboratory | TU | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00003170 | ||||||
Transcript | W02D3.3.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | |||||||
HGVSc | W02D3.3.1:c.10C>T | |||||||
HGVSp | CE31080:p.Gln4Ter | |||||||
cDNA_position | 13 | |||||||
CDS_position | 10 | |||||||
Protein_position | 4 | |||||||
Exon_number | 2/9 | |||||||
Codon_change | Caa/Taa | |||||||
Amino_acid_change | Q/* | |||||||
W02D3.3.3 | VEP_consequence | stop_gained | ||||||
VEP_impact | HIGH | |||||||
HGVSc | W02D3.3.3:c.10C>T | |||||||
HGVSp | CE31080:p.Gln4Ter | |||||||
cDNA_position | 86 | |||||||
CDS_position | 10 | |||||||
Protein_position | 4 | |||||||
Exon_number | 3/10 | |||||||
Codon_change | Caa/Taa | |||||||
Amino_acid_change | Q/* | |||||||
W02D3.3.2 | VEP_consequence | stop_gained | ||||||
VEP_impact | HIGH | |||||||
HGVSc | W02D3.3.2:c.10C>T | |||||||
HGVSp | CE31080:p.Gln4Ter | |||||||
cDNA_position | 93 | |||||||
CDS_position | 10 | |||||||
Protein_position | 4 | |||||||
Exon_number | 3/10 | |||||||
Codon_change | Caa/Taa | |||||||
Amino_acid_change | Q/* | |||||||
Genetics | Interpolated_map_position | I | 1.29905 | |||||
Description | Phenotype | WBPhenotype:0000315 | Paper_evidence | WBPaper00001125 | ||||
Person_evidence | WBPerson261 | |||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | may be Mec only in head | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | |||||||
Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00001125 | ||||
Curator_confirmed | WBPerson712 | |||||||
Person_evidence | WBPerson261 | |||||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0000456 | Paper_evidence | WBPaper00002482 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Temperature_sensitive | Heat_sensitive | Paper_evidence | WBPaper00002482 | |||||
Curator_confirmed | WBPerson712 | |||||||
Disease_info | Modifies_disease | DOID:1289 | ||||||
Modifies_disease_in_annotation | WBDOannot00000607 | |||||||
Reference | WBPaper00005559 | |||||||
WBPaper00013936 | ||||||||
WBPaper00001125 | ||||||||
WBPaper00010529 | ||||||||
WBPaper00002482 | ||||||||
Method | Substitution_allele |