WormBase Tree Display for Variation: WBVar00266616
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WBVar00266616 | Evidence | Paper_evidence | WBPaper00003414 | ||||||
---|---|---|---|---|---|---|---|---|---|
Name | Public_name | u241 | |||||||
Other_name | CE24843:p.Gly354Glu | ||||||||
C44B11.3.1:c.1061G>A | |||||||||
HGVSg | CHROMOSOME_III:g.3132025C>T | ||||||||
Sequence_details | SMap | S_parent | Sequence | C44B11 | |||||
Flanking_sequences | tgttatagctataatactgctttcaggtcg | aatcaactaccaaccaccaacggtagtccc | |||||||
Mapping_target | C44B11 | ||||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00003414 | ||||
SeqStatus | Sequenced | ||||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Laboratory | TU | ||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00003175 | |||||||
Transcript | C44B11.3.1 (11) | ||||||||
Interactor | WBInteraction000501199 | ||||||||
WBInteraction000501200 | |||||||||
WBInteraction000501201 | |||||||||
WBInteraction000501202 | |||||||||
WBInteraction000504762 | |||||||||
Genetics | Interpolated_map_position | III | -7.53299 | ||||||
Description | Phenotype | WBPhenotype:0000315 | Paper_evidence | WBPaper00001125 | |||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0000962 | Paper_evidence | WBPaper00038206 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | Animals exhibited reduced fluorescence in GFP-expressing touch receptor neurons (TRNs). | Paper_evidence | WBPaper00038206 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Phenotype_assay | Genotype | uIs22(Pmec-3::GFP) | Paper_evidence | WBPaper00038206 | |||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0001676 | Paper_evidence | WBPaper00001125 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | Touch cell processes have fewer or are missing large diameter microtubules compared to processes in control animals. | Paper_evidence | WBPaper00001125 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0002364 | Paper_evidence | WBPaper00044649 | |||||||
Curator_confirmed | WBPerson9270 | ||||||||
Remark | Spontaneous axon degeneration affecting PLM, PVM, ALM, and AVM. (Figure 5C, S3E-F) | Paper_evidence | WBPaper00044649 | ||||||
Curator_confirmed | WBPerson9270 | ||||||||
EQ_annotations | Anatomy_term | WBbt:0005490 | PATO:0000460 | Paper_evidence | WBPaper00044649 | ||||
Curator_confirmed | WBPerson9270 | ||||||||
WBbt:0004086 | PATO:0000460 | Paper_evidence | WBPaper00044649 | ||||||
Curator_confirmed | WBPerson9270 | ||||||||
WBbt:0005406 | PATO:0000460 | Paper_evidence | WBPaper00044649 | ||||||
Curator_confirmed | WBPerson9270 | ||||||||
WBbt:0003832 | PATO:0000460 | Paper_evidence | WBPaper00044649 | ||||||
Curator_confirmed | WBPerson9270 | ||||||||
Reference | WBPaper00038206 | ||||||||
WBPaper00001125 | |||||||||
WBPaper00003414 | |||||||||
WBPaper00044649 | |||||||||
Method | Substitution_allele |