WormBase Tree Display for Variation: WBVar00253059

WBVar00253059 Name: Public_name: tm4695
    Other_name: B0280.8.1:c.114-2_360+17del
    HGVSg: CHROMOSOME_III:g.7114398_7114708del
  Sequence_details: SMap: S_parent: Sequence: B0280
    Flanking_sequences: ccataaatacttaatggctcaatcgtttct gaaaaattataaagtttaatccgatttttt
    Mapping_target: B0280
    Source_location: 7 CHROMOSOME_III 7114397 7114709 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm4695_external
      tm4695_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4695
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00003609
    Transcript: B0280.8.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: B0280.8.1:c.114-2_360+17del
        Intron_number: 2-4/8
        Exon_number: 3-4/9
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype: WBPhenotype:0000031 Paper_evidence: WBPaper00042258
        Curator_confirmed: WBPerson1997
    Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Reference: WBPaper00042258
  Remark: 12363/12364-12674/12675 (311 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele