WormBase Tree Display for Variation: WBVar00253026

WBVar00253026 Name: Public_name: tm4650
    Other_name: C32C4.5a.1:c.367-18_*101del
    HGVSg: CHROMOSOME_V:g.10635232_10635512del
  Sequence_details: SMap: S_parent: Sequence: C32C4
    Flanking_sequences: atccaaaaaaaacacactgtttcccatttc gagattttgctgtcatacgctttcaattac
    Mapping_target: C32C4
    Source_location: 7 CHROMOSOME_V 10635231 10635513 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm4650_external
      tm4650_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4650
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00003114
    Transcript: C32C4.5b.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1/1
        Exon_number: 2/2
      C32C4.5a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C32C4.5a.1:c.367-18_*101del
        cDNA_position: ?-629
        Intron_number: 4/5
        Exon_number: 5-6/6
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson2021
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson2021
  Remark: 11764/11765-12045/12046 (281 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele