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WormBase Tree Display for Variation: WBVar00251454

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Name Class

WBVar00251454NamePublic_nametm2593
Other_nameF07A5.1b.1:c.441_738delinsACAAA
F07A5.1a.1:c.441_738delinsACAAA
F07A5.1a.2:c.441_738delinsACAAA
CE05554:p.Asn147LysfsTer29
CE17632:p.Asn147LysfsTer29
HGVSgCHROMOSOME_I:g.7351174_7351543delinsTTTGT
Sequence_detailsSMapS_parentSequenceF07A5
Flanking_sequencestgtgagaattgccgcgaatctttgtttgtcttgatttttccagagtaatccacaatgaaa
Mapping_targetF07A5
Source_location7CHROMOSOME_I73511737351544Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationInsertionTTTGT
Deletion
PCR_producttm2593_external
tm2593_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq2593
NBP_allele
StatusLive
AffectsGeneWBGene00002136
TranscriptF07A5.1b.1 (11)
F07A5.1a.2 (11)
F07A5.1a.1 (11)
IsolationMutagenTMP/UV
GeneticsMapI
DescriptionPhenotypeWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
Laboratory_evidenceFX
WBPhenotype:0000688Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan. Dr. D. Greenstein: Ste.Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
Laboratory_evidenceFX
Phenotype_not_observedWBPhenotype:0000643Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
RemarkComments to the National Bioresource Project of Japan: Dr. K. Subramaniam: normal locomotion.Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
Laboratory_evidenceFX
Remark2319/2320-TTTGT-2689/2690 (370 bp deletion + 5 bp insertion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele