WormBase Tree Display for Variation: WBVar00249213
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WBVar00249213 | Evidence | Paper_evidence | WBPaper00005629 | ||
---|---|---|---|---|---|
Name | Public_name | t2012 | |||
Other_name | T28F12.2f.1:c.3G>A | ||||
T28F12.2c.1:c.-1927G>A | |||||
CE21219:p.Met1? | |||||
CE33585:p.Met1? | |||||
T28F12.2d.2:c.-1363G>A | |||||
T28F12.2d.1:c.-1345G>A | |||||
T28F12.2a.1:c.3G>A | |||||
HGVSg | CHROMOSOME_V:g.4497469G>A | ||||
Sequence_details (5) | |||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00003994 | ||||
Laboratory | GE | ||||
Status | Live | ||||
Affects | Gene | WBGene00006796 | |||
Transcript | T28F12.2c.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T28F12.2c.1:c.-1927G>A | ||||
cDNA_position | 1 | ||||
Exon_number | 1/11 | ||||
T28F12.2d.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T28F12.2d.1:c.-1345G>A | ||||
cDNA_position | 7 | ||||
Exon_number | 1/12 | ||||
T28F12.2a.1 (12) | |||||
T28F12.2d.2 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T28F12.2d.2:c.-1363G>A | ||||
cDNA_position | 9 | ||||
Exon_number | 1/12 | ||||
T28F12.2f.1 (12) | |||||
Interactor | WBInteraction000503924 | ||||
Genetics | Interpolated_map_position | V | -5.20057 | ||
Description | Phenotype | WBPhenotype:0000052 | Paper_evidence | WBPaper00035977 | |
Curator_confirmed | WBPerson712 | ||||
WBPhenotype:0000274 | Paper_evidence | WBPaper00037125 | |||
Curator_confirmed | WBPerson712 | ||||
Maternal | |||||
Disease_info | Models_disease | DOID:1240 | |||
Models_disease_in_annotation | WBDOannot00000564 | ||||
Reference | WBPaper00005629 | ||||
WBPaper00015436 | |||||
WBPaper00035977 | |||||
WBPaper00037125 | |||||
Method | Substitution_allele |