WormBase Tree Display for Variation: WBVar00249027
expand all nodes | collapse all nodes | view schema
WBVar00249027 | Evidence | Paper_evidence | WBPaper00005632 | ||||||
---|---|---|---|---|---|---|---|---|---|
Name | Public_name | sy665 | |||||||
Other_name | F47A4.2.1:c.6424C>T | ||||||||
CE16058:p.Gln2142Ter | |||||||||
HGVSg | CHROMOSOME_X:g.9814946G>A | ||||||||
Sequence_details | SMap | S_parent | Sequence | F47A4 | |||||
Flanking_sequences | gttaaaggcggatggaagttcagaatgttc | aaacaactcggttggataaagttgcaaaga | |||||||
Mapping_target | F47A4 | ||||||||
Type_of_mutation | Substitution | c | t | ||||||
SeqStatus | Sequenced | ||||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Strain | WBStrain00030944 | ||||||||
Laboratory | PS | ||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00001081 | |||||||
Transcript | F47A4.2.1 | VEP_consequence | stop_gained | ||||||
VEP_impact | HIGH | ||||||||
HGVSc | F47A4.2.1:c.6424C>T | ||||||||
HGVSp | CE16058:p.Gln2142Ter | ||||||||
cDNA_position | 6527 | ||||||||
CDS_position | 6424 | ||||||||
Protein_position | 2142 | ||||||||
Exon_number | 14/21 | ||||||||
Codon_change | Caa/Taa | ||||||||
Amino_acid_change | Q/* | ||||||||
Genetics | Interpolated_map_position | X | 1.69661 | ||||||
Description | Phenotype | WBPhenotype:0000699 | Paper_evidence | WBPaper00005632 | |||||
Curator_confirmed | WBPerson625 | ||||||||
Remark | suppressor of multivulva | Paper_evidence | WBPaper00005632 | ||||||
Curator_confirmed | WBPerson625 | ||||||||
EQ_annotations | Anatomy_term | WBbt:0006748 | PATO:0000460 | Paper_evidence | WBPaper00005632 | ||||
Curator_confirmed | WBPerson625 | ||||||||
Reference | WBPaper00005632 | ||||||||
Method | Substitution_allele |