WormBase Tree Display for Variation: WBVar00248998
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WBVar00248998 | Name | Public_name | sy456 | ||||
---|---|---|---|---|---|---|---|
Other_name | CE38268:p.Trp490Ter | ||||||
CE38270:p.Trp615Ter | |||||||
C09E10.2d.1:c.1476G>A | |||||||
CE08039:p.Trp648Ter | |||||||
C09E10.2b.1:c.1944G>A | |||||||
CE08038:p.Trp646Ter | |||||||
C09E10.2a.1:c.1938G>A | |||||||
C09E10.2e.1:c.1845G>A | |||||||
C09E10.2c.1:c.1470G>A | |||||||
CE38269:p.Trp492Ter | |||||||
HGVSg | CHROMOSOME_X:g.986445C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | C09E10 | |||
Flanking_sequences | tggaaacgatttggcaagagttctccggtg | ggtggtggttataccggagaagaaaatccg | |||||
Mapping_target | C09E10 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00024616 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | PS | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00000958 | |||||
Transcript | C09E10.2d.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2d.1:c.1476G>A | ||||||
HGVSp | CE38269:p.Trp492Ter | ||||||
cDNA_position | 1476 | ||||||
CDS_position | 1476 | ||||||
Protein_position | 492 | ||||||
Exon_number | 9/14 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
C09E10.2c.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2c.1:c.1470G>A | ||||||
HGVSp | CE38268:p.Trp490Ter | ||||||
cDNA_position | 1470 | ||||||
CDS_position | 1470 | ||||||
Protein_position | 490 | ||||||
Exon_number | 9/14 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
C09E10.2a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2a.1:c.1938G>A | ||||||
HGVSp | CE08038:p.Trp646Ter | ||||||
cDNA_position | 2081 | ||||||
CDS_position | 1938 | ||||||
Protein_position | 646 | ||||||
Exon_number | 12/18 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
C09E10.2e.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2e.1:c.1845G>A | ||||||
HGVSp | CE38270:p.Trp615Ter | ||||||
cDNA_position | 1845 | ||||||
CDS_position | 1845 | ||||||
Protein_position | 615 | ||||||
Exon_number | 10/15 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
C09E10.2b.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2b.1:c.1944G>A | ||||||
HGVSp | CE08039:p.Trp648Ter | ||||||
cDNA_position | 2087 | ||||||
CDS_position | 1944 | ||||||
Protein_position | 648 | ||||||
Exon_number | 12/18 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
Genetics | Interpolated_map_position | X | -18.8717 | ||||
Method | Substitution_allele |