WormBase Tree Display for Variation: WBVar00248962
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WBVar00248962 | Evidence | Paper_evidence | WBPaper00026831 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | sy290 | |||||
Other_name (12) | |||||||
HGVSg | CHROMOSOME_IV:g.7686702C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F33D4 | |||
Flanking_sequences | attctaatgaatacaaatttgtttcaggtc | gcgatctggattttgcaaatgatgcatgca | |||||
Mapping_target | F33D4 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00026831 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00030832 | ||||||
WBStrain00030844 | |||||||
WBStrain00030866 | |||||||
WBStrain00040665 | |||||||
Laboratory | PS | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00002173 | |||||
Transcript | F33D4.2d.1 (12) | ||||||
F33D4.2g.1 (12) | |||||||
F33D4.2a.1 (12) | |||||||
F33D4.2f.1 (12) | |||||||
F33D4.2h.1 (12) | |||||||
F33D4.2e.1 (12) | |||||||
Interactor | WBInteraction000051431 | ||||||
WBInteraction000051432 | |||||||
WBInteraction000052166 | |||||||
WBInteraction000052169 | |||||||
WBInteraction000519131 | |||||||
WBInteraction000538566 | |||||||
WBInteraction000576760 | |||||||
WBInteraction000586251 | |||||||
Genetics | Interpolated_map_position | IV | 3.37733 | ||||
Description | Phenotype (2) | ||||||
Phenotype_not_observed | WBPhenotype:0000207 | Paper_evidence | WBPaper00028479 | ||||
Curator_confirmed | WBPerson2987 | ||||||
Remark | Figure 6A | Paper_evidence | WBPaper00028479 | ||||
Curator_confirmed | WBPerson2987 | ||||||
WBPhenotype:0000666 | Paper_evidence | WBPaper00042394 | |||||
Curator_confirmed | WBPerson1777 | ||||||
Remark | Do not exhibit overt ovulation or spermathecal transit defects; however, the sheath cell contractions are more frequent in these animals | Paper_evidence | WBPaper00042394 | ||||
Curator_confirmed | WBPerson1777 | ||||||
There were no detected changes in calcium dynamics, such as increased propagation speed nor increased frequency | Paper_evidence | WBPaper00042394 | |||||
Curator_confirmed | WBPerson1777 | ||||||
Reference | WBPaper00040692 | ||||||
WBPaper00040893 | |||||||
WBPaper00028479 | |||||||
WBPaper00003017 | |||||||
WBPaper00016949 | |||||||
WBPaper00023320 | |||||||
WBPaper00030553 | |||||||
WBPaper00042394 | |||||||
Method | Substitution_allele |