WormBase Tree Display for Variation: WBVar00248917
expand all nodes | collapse all nodes | view schema
| WBVar00248917 | Evidence | Paper_evidence | WBPaper00001485 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | sy127 | |||||
| Other_name | CE03827:p.Arg123Ter | ||||||
| ZK792.6.1:c.367C>T | |||||||
| HGVSg | CHROMOSOME_IV:g.11689959G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | ZK792 | |||
| Flanking_sequences | ttggtagggaataaatgtgatttgtcatct | gatcagtcgacttccgaacagtcagtgaga | |||||
| Mapping_target | ZK792 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00001485 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00026499 | ||||||
| Laboratory | PS | ||||||
| Status | Live | ||||||
| Linked_to | WBVar02125747 | ||||||
| Affects | Gene | WBGene00002335 | |||||
| Transcript | ZK792.6.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | ZK792.6.1:c.367C>T | ||||||
| HGVSp | CE03827:p.Arg123Ter | ||||||
| cDNA_position | 378 | ||||||
| CDS_position | 367 | ||||||
| Protein_position | 123 | ||||||
| Exon_number | 4/6 | ||||||
| Codon_change | Cga/Tga | ||||||
| Amino_acid_change | R/* | ||||||
| Genetics | Interpolated_map_position | IV | 5.20995 | ||||
| Description | Phenotype | WBPhenotype:0000062 | Paper_evidence | WBPaper00001355 | |||
| Curator_confirmed | WBPerson625 | ||||||
| Remark | recessive lethal | Paper_evidence | WBPaper00001355 | ||||
| Curator_confirmed | WBPerson625 | ||||||
| Recessive | Paper_evidence | WBPaper00001355 | |||||
| Curator_confirmed | WBPerson625 | ||||||
| Reference | WBPaper00001355 | ||||||
| WBPaper00001485 | |||||||
| Method | Substitution_allele |
