WormBase Tree Display for Variation: WBVar00248666

WBVar00248666 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00248666
    Other_name: snp_ZK1058[3]
      cewivar00196263
      ZK1058.6.1:c.614+17G>A
      ZK1058.6.2:c.614+17G>A
      ZK1058.6.3:c.614+17G>A
    HGVSg: CHROMOSOME_III:g.3923279G>A
  Sequence_details: SMap: S_parent: Sequence: ZK1058
    Flanking_sequences: agaaggaaggttagtaaagaccctt acttcaaattgcctagccacatatt
    Mapping_target: ZK1058
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023192 From_analysis: Million_mutation_project_reanalysis
    Analysis: SNP_Wicks
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00014206
    Transcript: ZK1058.6.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK1058.6.1:c.614+17G>A
        Intron_number: 6/7
      ZK1058.6.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK1058.6.3:c.614+17G>A
        Intron_number: 4/5
      ZK1058.6.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK1058.6.2:c.614+17G>A
        Intron_number: 5/6
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.5508 VarS=AG
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_ZK1058.3
    [20040130 db] this Allele was previously named snp_ZK1058.3
    [20090224 db] original Wicks name : ZK1058:25469..26413@267 Psnp=0.5508 VarS=AG
    [20090224 db] original Wicks id : eam68e05.s1@604,a,29
    [20090224 db] Snip-SNP
  Method: SNP_Wicks