WormBase Tree Display for Variation: WBVar00248665
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WBVar00248665 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00248665 | |||
Other_name | snp_ZK1058[2] | ||||
ZK1058.6.3:c.614+16dup | |||||
ZK1058.6.2:c.614+16dup | |||||
ZK1058.6.1:c.614+16dup | |||||
HGVSg | CHROMOSOME_III:g.3923278dup | ||||
Sequence_details | SMap | S_parent | Sequence | ZK1058 | |
Flanking_sequences | agaaggaaggttagtaaagaccctt | gacttcaaattgcctagccacatat | |||
Mapping_target | ZK1058 | ||||
Type_of_mutation | Insertion | T | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00014206 | |||
Transcript | ZK1058.6.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1058.6.1:c.614+16dup | ||||
Intron_number | 6/7 | ||||
ZK1058.6.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1058.6.3:c.614+16dup | ||||
Intron_number | 4/5 | ||||
ZK1058.6.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1058.6.2:c.614+16dup | ||||
Intron_number | 5/6 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.6662 VarI1=T | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_ZK1058.2 | |||||
[20040130 db] this Allele was previously named snp_ZK1058.2 | |||||
[20090224 db] original Wicks name : ZK1058:25469..26413@266 Psnp=0.6662 VarI1=T | |||||
[20090224 db] original Wicks id : eam68e05.s1@605,t,33 | |||||
Method | SNP_Wicks |