WormBase Tree Display for Variation: WBVar00248615

WBVar00248615 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00248615
    Other_name: snp_ZK822[2]
      CE18466:p.Leu55=
      ZK822.5.1:c.165T>C
    HGVSg: CHROMOSOME_IV:g.11938114T>C
  Sequence_details: SMap: S_parent: Sequence: ZK822
    Flanking_sequences: aatatttgatgggaggtcgacaact cccccacttccagttgctctgtccc
    Mapping_target: ZK822
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00014092
    Transcript: ZK822.5.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK822.5.1:c.165T>C
        HGVSp: CE18466:p.Leu55=
        cDNA_position: 166
        CDS_position: 165
        Protein_position: 55
        Exon_number: 3/9
        Codon_change: ctT/ctC
        Amino_acid_change: L
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.4429 VarS=CT
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_ZK822.2
    [20040130 db] this Allele was previously named snp_ZK822.2
    [20090224 db] original Wicks name : ZK822:22130..23074@144 Psnp=0.4429 VarS=CT
    [20090224 db] original Wicks id : eam58f10.s1@732,c,27
  Method: SNP_Wicks