WormBase Tree Display for Variation: WBVar00248503
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WBVar00248503 | Name | Public_name | WBVar00248503 | ||
---|---|---|---|---|---|
Other_name | snp_ZK105[1] | ||||
haw168479 | |||||
cewivar00239471 | |||||
ZK105.11.1:c.432+67A>G | |||||
HGVSg | CHROMOSOME_V:g.7708083T>C | ||||
Sequence_details | SMap | S_parent | Sequence | ZK105 | |
Flanking_sequences | taggggcaattccagctttaaggat | atcttatagttaggtatgtatattt | |||
Mapping_target | ZK105 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00588344 | |||
Status | Live | ||||
Affects | Gene | WBGene00194895 | |||
Transcript | ZK105.11.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK105.11.1:c.432+67A>G | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Remark | Predicted SNP: Psnp=0.8806 VarS=CT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_ZK105.1 | |||||
[20040130 db] this Allele was previously named snp_ZK105.1 | |||||
[20090224 db] original Wicks name : ZK105:13931..14736@124 Psnp=0.8806 VarS=CT | |||||
[20090224 db] original Wicks id : vl31f01.s1@79,c,39 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |