WormBase Tree Display for Variation: WBVar00248400
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WBVar00248400 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00248400 | |||
Other_name | snp_Y116F11A[2] | ||||
cewivar00264131 | |||||
Y116F11A.6.1:c.-4+3434G>A | |||||
HGVSg | CHROMOSOME_V:g.19723114G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y116F11A | |
Flanking_sequences | gcccacccgggagcgaaattttttt | gtcttatttcattattcctatattc | |||
Mapping_target | Y116F11A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00013819 | |||
Transcript | Y116F11A.6.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y116F11A.6.1:c.-4+3434G>A | ||||
Intron_number | 1/4 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9407 VarS=AG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y116F11.2 | |||||
[20040130 db] this Allele was previously named snp_Y116F11.2 | |||||
[20090224 db] this Variation was previously named snp_Y116F11[2] | |||||
[20090224 db] original Wicks name : Y116F11A:867..1819@452 Psnp=0.9407 VarS=AG | |||||
[20090224 db] original Wicks id : eam68e02.s1@382,a,53 | |||||
Method | SNP_Wicks |