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WormBase Tree Display for Variation: WBVar00248400

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Name Class

WBVar00248400EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00248400
Other_namesnp_Y116F11A[2]
cewivar00264131
Y116F11A.6.1:c.-4+3434G>A
HGVSgCHROMOSOME_V:g.19723114G>A
Sequence_detailsSMapS_parentSequenceY116F11A
Flanking_sequencesgcccacccgggagcgaaatttttttgtcttatttcattattcctatattc
Mapping_targetY116F11A
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00013819
TranscriptY116F11A.6.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11A.6.1:c.-4+3434G>A
Intron_number1/4
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9407 VarS=AG
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y116F11.2
[20040130 db] this Allele was previously named snp_Y116F11.2
[20090224 db] this Variation was previously named snp_Y116F11[2]
[20090224 db] original Wicks name : Y116F11A:867..1819@452 Psnp=0.9407 VarS=AG
[20090224 db] original Wicks id : eam68e02.s1@382,a,53
MethodSNP_Wicks