WormBase Tree Display for Variation: WBVar00248399

WBVar00248399 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00248399
    Other_name: snp_Y116F11A[1]
      cewivar00264130
      Y116F11A.6.1:c.-4+3341C>G
    HGVSg: CHROMOSOME_V:g.19723021C>G
  Sequence_details: SMap: S_parent: Sequence: Y116F11A
    Flanking_sequences: tctcctaaccgcccttccctccccg cgaccatcggcttccgtggcgcaat
    Mapping_target: Y116F11A
    Type_of_mutation: Substitution: C G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
    Analysis: SNP_Wicks
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00013819
    Transcript: Y116F11A.6.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y116F11A.6.1:c.-4+3341C>G
        Intron_number: 1/4
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9430 VarS=CG
    Enzymes. Bristol-specific: [AciI,Bsc107I,Bsc4I,Bse23I,BseLI,BsiYI,BslI,BsmYI,BstFZ438I,FauI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_Y116F11.1
    [20040130 db] this Allele was previously named snp_Y116F11.1
    [20090224 db] this Variation was previously named snp_Y116F11[1]
    [20090224 db] original Wicks name : Y116F11A:867..1819@359 Psnp=0.9430 VarS=CG
    [20090224 db] original Wicks id : eam68e02.s1@289,g,62
    [20090224 db] Snip-SNP
  Method: SNP_Wicks