WormBase Tree Display for Variation: WBVar00248364
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WBVar00248364 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00248364 | |||
Other_name | snp_Y113G7A[8] | ||||
Y113G7A.1.1:c.724-234_724-229del | |||||
HGVSg | CHROMOSOME_V:g.20052077_20052082del | ||||
Sequence_details | SMap | S_parent | Sequence | Y113G7A | |
Flanking_sequences | aattctgaaatgtcagaatatgggt | aaaaatatgggtgtcaaattggtgt | |||
Mapping_target | Y113G7A | ||||
Type_of_mutation | Deletion | GTCAAA | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00005440 | |||
Transcript | Y113G7A.1.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y113G7A.1.1:c.724-234_724-229del | ||||
Intron_number | 4/5 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.4689 VarD6=GTCAAA | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y113G7.8 | |||||
[20040130 db] this Allele was previously named snp_Y113G7.8 | |||||
[20090224 db] this Variation was previously named snp_Y113G7[8] | |||||
[20090224 db] original Wicks name : Y113G7A:25272..26170@386 Psnp=0.4689 VarD6=GTCAAA | |||||
[20090224 db] original Wicks id : yy47f03.s1@476,-,29 | |||||
Method | SNP_Wicks |