WormBase Tree Display for Variation: WBVar00248137
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WBVar00248137 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00248137 | |||
Other_name | snp_Y76A2A[2] | ||||
T27E9.7.1:c.*448del | |||||
HGVSg | CHROMOSOME_III:g.13457755del | ||||
Sequence_details | SMap | S_parent | Sequence | Y76A2A | |
Flanking_sequences | tacatgaattagatgaaaaaaaaaa | caatttttagtttgaaattttaatg | |||
Mapping_target | Y76A2A | ||||
Type_of_mutation | Deletion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00012097 | |||
Transcript | T27E9.7.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T27E9.7.1:c.*448del | ||||
cDNA_position | 2348 | ||||
Exon_number | 8/8 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9221 VarD1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y76A2.2 | |||||
[20040130 db] this Allele was previously named snp_Y76A2.2 | |||||
[20090224 db] this Variation was previously named snp_Y76A2[2] | |||||
[20090224 db] original Wicks name : Y76A2A:14712..15505@299 Psnp=0.9221 VarD1=A | |||||
[20090224 db] original Wicks id : yy59d08.s1@246,-,59 | |||||
Method | SNP_Wicks |