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WormBase Tree Display for Variation: WBVar00248118

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Name Class

WBVar00248118NamePublic_nameWBVar00248118
Other_namesnp_Y73F8A[44]
haw157608
cewivar00215239
Y73F8A.26b.1:c.775-49G>C
Y73F8A.26a.1:c.1078-49G>C
HGVSgCHROMOSOME_IV:g.15476605G>C
Sequence_detailsSMapS_parentSequenceY73F8A
Flanking_sequencesgtccaagcaacagagaaaccagtgtacatggttgtgcttatagttaactt
Mapping_targetY73F8A
Type_of_mutationSubstitutionGC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
PersonWBPerson4037
AnalysisSNP_Wicks
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00577473
StatusLive
AffectsGeneWBGene00013531
TranscriptY73F8A.26a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.26a.1:c.1078-49G>C
Intron_number6/8
Y73F8A.26b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.26b.1:c.775-49G>C
Intron_number4/5
ReferenceWBPaper00038208
WBPaper00004703
RemarkPredicted SNP: Psnp=0.9430 VarS=CG
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y73F8.44
[20040130 db] this Allele was previously named snp_Y73F8.44
[20090224 db] this Variation was previously named snp_Y73F8[44]
[20090224 db] original Wicks name : Y73F8A:249520..250459@749 Psnp=0.9430 VarS=CG
[20090224 db] original Wicks id : eam57e07.s1@118,c,62
MethodSNP_Wicks