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WormBase Tree Display for Variation: WBVar00248020

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Name Class

WBVar00248020EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00248020
Other_namesnp_Y71H2AM[9]
Y71H2AM.2a.1:c.392-43dup
Y71H2AM.2b.1:c.392-43dup
Y71H2AM.2a.3:c.392-43dup
Y71H2AM.2a.2:c.392-43dup
HGVSgCHROMOSOME_III:g.2823425dup
Sequence_detailsSMapS_parentSequenceY71H2AM
Flanking_sequencesttttaatgaaaaaaggtttttttttcaaaattccacaaaaattttaatttttttt
Mapping_targetY71H2AM
Type_of_mutationInsertionT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00022167
TranscriptY71H2AM.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.2b.1:c.392-43dup
Intron_number3/6
Y71H2AM.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.2a.1:c.392-43dup
Intron_number3/6
Y71H2AM.2a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.2a.3:c.392-43dup
Intron_number3/5
Y71H2AM.2a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.2a.2:c.392-43dup
Intron_number3/6
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.7066 VarI1=T
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y71H2AM.9
[20040130 db] this Allele was previously named snp_Y71H2AM.9
[20090224 db] original Wicks name : Y71H2AM:131959..132923@139 Psnp=0.7066 VarI1=T
[20090224 db] original Wicks id : yw17a08.s1@71,t,34
MethodSNP_Wicks