WormBase Tree Display for Variation: WBVar00247991
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WBVar00247991 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00247991 | |||
Other_name | snp_Y71G12B[11] | ||||
Y71G12B.11b.1:c.684-466G>A | |||||
Y71G12B.11a.1:c.684-466G>A | |||||
HGVSg | CHROMOSOME_I:g.1724581G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y71G12B | |
Flanking_sequences | agcaaattctcggtcattttgaaca | cacccaaaagttttttttaaatata | |||
Mapping_target | Y71G12B | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00006771 | |||
Transcript | Y71G12B.11a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12B.11a.1:c.684-466G>A | ||||
Intron_number | 3/11 | ||||
Y71G12B.11b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12B.11b.1:c.684-466G>A | ||||
Intron_number | 3/12 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9427 VarS=AG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y71G12B.11 | |||||
[20040130 db] this Allele was previously named snp_Y71G12B.11 | |||||
[20090224 db] original Wicks name : Y71G12B:83387..84590@768 Psnp=0.9427 VarS=AG | |||||
[20090224 db] original Wicks id : vl21f04.s1@373,a,59 | |||||
Method | SNP_Wicks |