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WormBase Tree Display for Variation: WBVar00247991

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Name Class

WBVar00247991EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247991
Other_namesnp_Y71G12B[11]
Y71G12B.11b.1:c.684-466G>A
Y71G12B.11a.1:c.684-466G>A
HGVSgCHROMOSOME_I:g.1724581G>A
Sequence_detailsSMapS_parentSequenceY71G12B
Flanking_sequencesagcaaattctcggtcattttgaacacacccaaaagttttttttaaatata
Mapping_targetY71G12B
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00006771
TranscriptY71G12B.11a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12B.11a.1:c.684-466G>A
Intron_number3/11
Y71G12B.11b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12B.11b.1:c.684-466G>A
Intron_number3/12
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9427 VarS=AG
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y71G12B.11
[20040130 db] this Allele was previously named snp_Y71G12B.11
[20090224 db] original Wicks name : Y71G12B:83387..84590@768 Psnp=0.9427 VarS=AG
[20090224 db] original Wicks id : vl21f04.s1@373,a,59
MethodSNP_Wicks