WormBase Tree Display for Variation: WBVar00247985
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WBVar00247985 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00247985 | |||
Other_name | snp_Y71G12B[5] | ||||
Y71G12B.12c.1:c.588+909_588+910insC | |||||
Y71G12B.12a.1:c.594+909_594+910insC | |||||
HGVSg | CHROMOSOME_I:g.1713737_1713738insC | ||||
Sequence_details | SMap | S_parent | Sequence | Y71G12B | |
Flanking_sequences | ccagtttttttttaattcaaaaatt | aaaaaaaaaaaaaaaaaatttccgg | |||
Mapping_target | Y71G12B | ||||
Type_of_mutation | Insertion | C | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00022152 | |||
Transcript | Y71G12B.12c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12B.12c.1:c.588+909_588+910insC | ||||
Intron_number | 3/4 | ||||
Y71G12B.12a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12B.12a.1:c.594+909_594+910insC | ||||
Intron_number | 3/4 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.4158 VarI1=C | ||||
Enzymes. Bristol-specific: [MseI,Tru1I,Tru9I]. CB4856-specific [none]. | |||||
[20040130 db] this Locus was previously named snp_Y71G12B.5 | |||||
[20040130 db] this Allele was previously named snp_Y71G12B.5 | |||||
[20090224 db] original Wicks name : Y71G12B:72848..73748@463 Psnp=0.4158 VarI1=C | |||||
[20090224 db] original Wicks id : eam69b12.s1@367,c,28 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |