WormBase Tree Display for Variation: WBVar00247961
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WBVar00247961 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00247961 | |||
Other_name | snp_Y71G10AL[1] | ||||
Y71G10AL.1a.1:c.1223+364del | |||||
Y71G10AL.1b.1:c.1229+364del | |||||
HGVSg | CHROMOSOME_IV:g.2182906del | ||||
Sequence_details | SMap | S_parent | Sequence | Y71G10AL | |
Flanking_sequences | actgaaaattcactaaaatagcttaaaatt | aaaaaaaattgactgaaagtagctg | |||
Mapping_target | Y71G10AL | ||||
Type_of_mutation | Deletion | T | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00305880 | |||
WBGene00022134 | |||||
Transcript | Y71G10AL.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G10AL.1a.1:c.1223+364del | ||||
Intron_number | 8/14 | ||||
Y71G10AR.6 | |||||
Y71G10AL.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G10AL.1b.1:c.1229+364del | ||||
Intron_number | 8/14 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9226 VarD1=T | ||||
Enzymes. Bristol-specific: [AcsI,ApoI,DraI,FsiI,PauAII,Srl61DI,Srl76DI,SruI,XapI]. CB4856-specific [none]. | |||||
[20040130 db] this Locus was previously named snp_Y71G10AL.1 | |||||
[20040130 db] this Allele was previously named snp_Y71G10AL.1 | |||||
[20090224 db] original Wicks name : Y71G10AL:4592..5516@435 Psnp=0.9226 VarD1=T | |||||
[20090224 db] original Wicks id : yy41g11.s1@422,-,62 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |