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WormBase Tree Display for Variation: WBVar00247890

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Name Class

WBVar00247890EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247890
Other_namesnp_Y67D8A[2]
cewivar00203917
Y67D8A.2g.1:c.81+109A>C
Y67D8A.2b.1:c.2142+109A>C
Y67D8A.2d.1:c.279+109A>C
Y67D8A.2a.1:c.2142+109A>C
Y67D8A.2f.1:c.81+109A>C
Y67D8A.2e.1:c.279+109A>C
HGVSgCHROMOSOME_IV:g.3238334A>C
Sequence_detailsSMapS_parentSequenceY67D8A
Flanking_sequencescgaggggccgacaagtttcagcggccatttatcttgctttgttttcgcctgttttcttttgtttttcaca
Mapping_targetY67D8A
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00022059
TranscriptY67D8A.2g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY67D8A.2g.1:c.81+109A>C
Intron_number1/8
Y67D8A.2f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY67D8A.2f.1:c.81+109A>C
Intron_number1/7
Y67D8A.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY67D8A.2e.1:c.279+109A>C
Intron_number2/9
Y67D8A.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY67D8A.2b.1:c.2142+109A>C
Intron_number12/21
Y67D8A.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY67D8A.2d.1:c.279+109A>C
Intron_number2/8
Y67D8A.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY67D8A.2a.1:c.2142+109A>C
Intron_number12/20
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9226 VarS=AC
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y67D8.2
[20040130 db] this Allele was previously named snp_Y67D8.2
[20090224 db] this Variation was previously named snp_Y67D8[2]
[20090224 db] original Wicks name : Y67D8A:20861..21618@408 Psnp=0.9226 VarS=AC
[20090224 db] original Wicks id : yy55e11.s1@303,c,44
[20090224 db] Snip-SNP
MethodSNP_Wicks