WormBase Tree Display for Variation: WBVar00247883
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WBVar00247883 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00247883 | |||
Other_name | snp_Y67A10A[5] | ||||
Y67A10A.5.1:c.598-23C>A | |||||
HGVSg | CHROMOSOME_IV:g.14320057G>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y67A10A | |
Flanking_sequences | aacctgaaattgtttggtagttgct | gatcacttcattattaattggaatt | |||
Mapping_target | Y67A10A | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00166978 | |||
WBGene00168242 | |||||
WBGene00013454 | |||||
Transcript | Y67A10A.189 | ||||
Y67A10A.213 | |||||
Y67A10A.5.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67A10A.5.1:c.598-23C>A | ||||
Intron_number | 2/2 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9430 VarS=GT | ||||
Enzymes. Bristol-specific: [AclWI,AlwI,BspPI,BsrWI,Bst31TI,BstH9I,BthII,Ral8I]. CB4856-specific [none]. | |||||
[20040130 db] this Locus was previously named snp_Y67A10.5 | |||||
[20040130 db] this Allele was previously named snp_Y67A10.5 | |||||
[20090224 db] this Variation was previously named snp_Y67A10[5] | |||||
[20090224 db] original Wicks name : Y67A10A:1..1916@1717 Psnp=0.9430 VarS=GT | |||||
[20090224 db] original Wicks id : yw98g12.s1@93,t,62 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |