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WormBase Tree Display for Variation: WBVar00247816

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Name Class

WBVar00247816EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247816
Other_namesnp_Y59C2A[5]
cewivar00683916
Y59C2A.3.1:c.528+126del
HGVSgCHROMOSOME_II:g.2218756del
Sequence_detailsSMapS_parentSequenceY59C2A
Flanking_sequencesacttgaactcgtgacctccagactgtagcggccaccacttccgactgagc
Mapping_targetY59C2A
Type_of_mutationDeletionC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021986
TranscriptY59C2A.3.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY59C2A.3.1:c.528+126del
Intron_number3/7
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9226 VarD1=C
Enzymes. Bristol-specific: [AceII,AsuNHI,Cac8I,NheI,PstNHI]. CB4856-specific [none].
[20040130 db] this Locus was previously named snp_Y59C2.5
[20040130 db] this Allele was previously named snp_Y59C2.5
[20090224 db] this Variation was previously named snp_Y59C2[5]
[20090224 db] original Wicks name : Y59C2A:17973..18882@403 Psnp=0.9226 VarD1=C
[20090224 db] original Wicks id : yy45e01.s1@452,-,62
[20090224 db] Snip-SNP
MethodSNP_Wicks