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WormBase Tree Display for Variation: WBVar00247752

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Name Class

WBVar00247752EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247752
Other_namesnp_Y57A10C[1]
CE18416:p.Gln353SerfsTer?
Y57A10C.4.1:c.1055_1056insC
HGVSgCHROMOSOME_II:g.12419157_12419158insG
Sequence_detailsSMapS_parentSequenceY57A10C
Flanking_sequencestcaagtccaggcgctcttcaattgacgaaaatacgtgtcagtttccaatg
Mapping_targetY57A10C
Type_of_mutationInsertionG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00013282
TranscriptY57A10C.4.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScY57A10C.4.1:c.1055_1056insC
HGVSpCE18416:p.Gln353SerfsTer?
cDNA_position1055-1056
CDS_position1055-1056
Protein_position352
Exon_number5/5
Codon_changecgt/cgCt
Amino_acid_changeR/RX
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.4688 VarI1=G
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y57A10C.1
[20040130 db] this Allele was previously named snp_Y57A10C.1
[20090224 db] original Wicks name : Y57A10C:7323..8195@122 Psnp=0.4688 VarI1=G
[20090224 db] original Wicks id : vl22b04.s1@60,g,29
MethodSNP_Wicks