WormBase Tree Display for Variation: WBVar00247752
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WBVar00247752 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00247752 | |||
Other_name | snp_Y57A10C[1] | ||||
CE18416:p.Gln353SerfsTer? | |||||
Y57A10C.4.1:c.1055_1056insC | |||||
HGVSg | CHROMOSOME_II:g.12419157_12419158insG | ||||
Sequence_details | SMap | S_parent | Sequence | Y57A10C | |
Flanking_sequences | tcaagtccaggcgctcttcaattga | cgaaaatacgtgtcagtttccaatg | |||
Mapping_target | Y57A10C | ||||
Type_of_mutation | Insertion | G | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00013282 | |||
Transcript | Y57A10C.4.1 | VEP_consequence | frameshift_variant | ||
VEP_impact | HIGH | ||||
HGVSc | Y57A10C.4.1:c.1055_1056insC | ||||
HGVSp | CE18416:p.Gln353SerfsTer? | ||||
cDNA_position | 1055-1056 | ||||
CDS_position | 1055-1056 | ||||
Protein_position | 352 | ||||
Exon_number | 5/5 | ||||
Codon_change | cgt/cgCt | ||||
Amino_acid_change | R/RX | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.4688 VarI1=G | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y57A10C.1 | |||||
[20040130 db] this Allele was previously named snp_Y57A10C.1 | |||||
[20090224 db] original Wicks name : Y57A10C:7323..8195@122 Psnp=0.4688 VarI1=G | |||||
[20090224 db] original Wicks id : vl22b04.s1@60,g,29 | |||||
Method | SNP_Wicks |