WormBase Tree Display for Variation: WBVar00247695
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WBVar00247695 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00247695 | |||
Other_name | snp_Y55F3BR[3] | ||||
Y55F3BR.8b.1:c.784-102_784-101insA | |||||
Y55F3BR.8a.1:c.853-102_853-101insA | |||||
HGVSg | CHROMOSOME_IV:g.850765dup | ||||
Sequence_details | SMap | S_parent | Sequence | Y55F3BR | |
Flanking_sequences | aaaagttaggccatcaatttttttt | ctcaaaaaaaggtgttttctttgaa | |||
Mapping_target | Y55F3BR | ||||
Type_of_mutation | Insertion | T | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00021945 | |||
Transcript | Y55F3BR.8a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3BR.8a.1:c.853-102_853-101insA | ||||
Intron_number | 5/7 | ||||
Y55F3BR.8b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3BR.8b.1:c.784-102_784-101insA | ||||
Intron_number | 4/6 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.8886 VarI1=T | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y55F3BR.3 | |||||
[20040130 db] this Allele was previously named snp_Y55F3BR.3 | |||||
[20090224 db] original Wicks name : Y55F3BR:23670..24508@137 Psnp=0.8886 VarI1=T | |||||
[20090224 db] original Wicks id : yx25d08.s1@486,t,15 yy45f07.s1@133,t,39 | |||||
Method | SNP_Wicks |