WormBase Tree Display for Variation: WBVar00247690
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WBVar00247690 | Name | Public_name | WBVar00247690 | ||
---|---|---|---|---|---|
Other_name | snp_Y55F3AM[6] | ||||
haw148476 | |||||
cewivar00030630 | |||||
Y55F3AM.4a.1:c.394-23A>G | |||||
HGVSg | CHROMOSOME_IV:g.1011833A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y55F3AM | |
Flanking_sequences | ccctaaaatccgtgatttttttcgc | ctaattcttcaattttttccagcaa | |||
Mapping_target | Y55F3AM | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (22) | |||||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00568341 | |||
Status | Live | ||||
Affects | Gene | WBGene00021922 | |||
Transcript | Y55F3AM.4a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3AM.4a.1:c.394-23A>G | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Remark | Predicted SNP: Psnp=0.8657 VarS=AG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y55F3AM.6 | |||||
[20040130 db] this Allele was previously named snp_Y55F3AM.6 | |||||
[20090224 db] original Wicks name : Y55F3AM:32265..33032@180 Psnp=0.8657 VarS=AG | |||||
[20090224 db] original Wicks id : yy61d11.s1@531,g,38 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |