WormBase Tree Display for Variation: WBVar00247648

WBVar00247648 Name: Public_name: WBVar00247648
    Other_name: snp_Y54G2A[36]
      haw150868
      cewivar00203685
      Y54G2A.73a.1:c.104G>A
      CE48590:p.Gly35Asp
    HGVSg: CHROMOSOME_IV:g.3008727C>T
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: caaatctccatttccacgctctaca caatcgctggatgaatttcctcggc
    Mapping_target: Y54G2A
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (11)
    Person: WBPerson4037
    Analysis: SNP_Wicks
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00570733
    Status: Live
  Affects: Gene: WBGene00219425
    Transcript: Y54G2A.73a.1 (12)
  Reference: WBPaper00038208
    WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9420 VarS=CT
    Enzymes. Bristol-specific: [AccB7I,AcpII,Asp10HII,BasI,Bsc107I,Bsc4I,Bse23I,BseLI,BsiYI,BslI,BsmYI,Esp1396I,PflMI,Van91I]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_Y54G2.36
    [20040130 db] this Allele was previously named snp_Y54G2.36
    [20090224 db] this Variation was previously named snp_Y54G2[36]
    [20090224 db] original Wicks name : Y54G2A:258333..259244@174 Psnp=0.9420 VarS=CT
    [20090224 db] original Wicks id : yy44g06.s1@110,t,56
    [20090224 db] Snip-SNP
  Method: SNP_Wicks