WormBase Tree Display for Variation: WBVar00247635

WBVar00247635 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00247635
    Other_name: snp_Y54G2A[23]
      Y54G2A.16b.1:c.72+1375del
    HGVSg: CHROMOSOME_IV:g.2863397del
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: tctggagctgggaaatatatttttt aataactgaggaactcaaattatca
    Mapping_target: Y54G2A
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00021881
    Transcript: Y54G2A.16b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.16b.1:c.72+1375del
        Intron_number: 1/5
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.8889 VarD1=T
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_Y54G2.23
    [20040130 db] this Allele was previously named snp_Y54G2.23
    [20090224 db] this Variation was previously named snp_Y54G2[23]
    [20090224 db] original Wicks name : Y54G2A:112711..113647@466 Psnp=0.8889 VarD1=T
    [20090224 db] original Wicks id : vc89g11.s1@406,-,59 vr92c05.s1@294,-,32
  Method: SNP_Wicks