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WormBase Tree Display for Variation: WBVar00247591

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Name Class

WBVar00247591EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247591
Other_namesnp_Y54E10A[8]
Y54E10A.11.1:c.4279-727_4279-726insT
Y54E10A.11.2:c.4279-727_4279-726insT
HGVSgCHROMOSOME_I:g.3177300dup
Sequence_detailsSMapS_parentSequenceY54E10A
Flanking_sequencesttttcgatttttccagaaaaagaaatcggaaataaaaaaatcataatttt
Mapping_targetY54E10A
Type_of_mutationInsertionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00021831
TranscriptY54E10A.11.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.11.1:c.4279-727_4279-726insT
Intron_number14/15
Y54E10A.11.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.11.2:c.4279-727_4279-726insT
Intron_number14/15
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.5729 VarI1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y54E10.8
[20040130 db] this Allele was previously named snp_Y54E10.8
[20090224 db] this Variation was previously named snp_Y54E10[8]
[20090224 db] original Wicks name : Y54E10A:16863..18071@848 Psnp=0.5729 VarI1=A
[20090224 db] original Wicks id : yw96h06.s1@294,a,31
MethodSNP_Wicks