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WormBase Tree Display for Variation: WBVar00247457

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Name Class

WBVar00247457NamePublic_nameWBVar00247457
Other_namesnp_Y49F6A[3]
haw128836
cewivar00183330
Y49F6A.5.1:c.850+70T>G
HGVSgCHROMOSOME_II:g.3608634A>C
Sequence_detailsSMapS_parentSequenceY49F6A
Flanking_sequencesggtaggcgccaaaaccctcgacttctaagacctgcaccgatcttgtggaa
Mapping_targetY49F6A
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryAX
PersonWBPerson4037
AnalysisSNP_Wicks
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00548701
WBVar01368208
StatusLive
AffectsGeneWBGene00021713
TranscriptY49F6A.5.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49F6A.5.1:c.850+70T>G
Intron_number5/6
ReferenceWBPaper00038208
WBPaper00004703
WBPaper00037807
RemarkPredicted SNP: Psnp=0.9301 VarS=AC
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y49F6.3
[20040130 db] this Allele was previously named snp_Y49F6.3
[20090224 db] this Variation was previously named snp_Y49F6[3]
[20090224 db] original Wicks name : Y49F6A:21378..22336@408 Psnp=0.9301 VarS=AC
[20090224 db] original Wicks id : eam69c12.s1@483,c,46
[20090224 db] Snip-SNP
MethodSNP_Wicks