WormBase Tree Display for Variation: WBVar00247427

WBVar00247427 Name: Public_name: WBVar00247427
    Other_name: snp_Y48G8AR[6]
      cewivar00119649
      Y48G8AR.8.1:c.109-410T>C
    HGVSg: CHROMOSOME_I:g.1272590T>C
  Sequence_details: SMap: S_parent: Sequence: Y48G8AR
    Flanking_sequences: gtttcatcatcaattctcgggtccg agtggtagccccgggggtgaaacta
    Mapping_target: Y48G8AR
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (25)
    Laboratory: QX
      AX
    Person: WBPerson1730
    Analysis: SNP_Wicks
      WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Andersen
    History: Acquires_merge: WBVar01303772
        WBVar01417830
        WBVar01430115
    Status: Live
  Affects: Gene: WBGene00271777
    Transcript: Y48G8AR.8.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48G8AR.8.1:c.109-410T>C
        Intron_number: 2/3
  Reference: WBPaper00040707
    WBPaper00004703
    WBPaper00037807
  Remark: Predicted SNP: Psnp=0.5508 VarS=CT
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_Y48G8AR.6
    [20040130 db] this Allele was previously named snp_Y48G8AR.6
    [20090224 db] original Wicks name : Y48G8AR:17410..18295@152 Psnp=0.5508 VarS=CT
    [20090224 db] original Wicks id : yx29f06.s1@664,c,29
    [20090224 db] Snip-SNP
  Method: SNP_Wicks