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WormBase Tree Display for Variation: WBVar00247307

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Name Class

WBVar00247307EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247307
Other_namesnp_Y47D3A[15]
Y47D3A.16.1:c.1325+71del
HGVSgCHROMOSOME_III:g.11249125del
Sequence_detailsSMapS_parentSequenceY47D3A
Flanking_sequencestagaaaaaatcgccgaaaaaaaaaactgaaaaacttagaaaatttgcttt
Mapping_targetY47D3A
Type_of_mutationDeletionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00012929
TranscriptY47D3A.16.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY47D3A.16.1:c.1325+71del
Intron_number5/7
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9212 VarD1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y47D3.15
[20040130 db] this Allele was previously named snp_Y47D3.15
[20090224 db] this Variation was previously named snp_Y47D3[15]
[20090224 db] original Wicks name : Y47D3A:112657..113461@319 Psnp=0.9212 VarD1=A
[20090224 db] original Wicks id : vr92d04.s1@248,-,56
MethodSNP_Wicks