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WormBase Tree Display for Variation: WBVar00247122

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Name Class

WBVar00247122EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247122
Other_namesnp_Y41C4A[6]
Y41C4A.4c.1:c.117-587dup
Y41C4A.4e.1:c.93-587dup
Y41C4A.4g.1:c.468-587dup
Y41C4A.4d.1:c.168-587dup
Y41C4A.4b.1:c.150-587dup
Y41C4A.4a.1:c.150-587dup
HGVSgCHROMOSOME_III:g.11684623dup
Sequence_detailsSMapS_parentSequenceY41C4A
Flanking_sequencesggatgggctacaaaggattttttttccggaaaatcggcaacttgccggaa
Mapping_targetY41C4A
Type_of_mutationInsertionT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00000793
TranscriptY41C4A.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4e.1:c.93-587dup
Intron_number3/8
Y41C4A.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4g.1:c.468-587dup
Intron_number1/6
Y41C4A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4b.1:c.150-587dup
Intron_number2/6
Y41C4A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4a.1:c.150-587dup
Intron_number3/8
Y41C4A.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4d.1:c.168-587dup
Intron_number3/8
Y41C4A.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4c.1:c.117-587dup
Intron_number2/6
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.8415 VarI1=T
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y41C4.6
[20040130 db] this Allele was previously named snp_Y41C4.6
[20090224 db] this Variation was previously named snp_Y41C4[6]
[20090224 db] original Wicks name : Y41C4A:46218..47262@459 Psnp=0.8415 VarI1=T
[20090224 db] original Wicks id : yy56f03.s1@395,t,39
MethodSNP_Wicks